Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AMP23694.1DNA mismatch repair protein MutT; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Nudix hydrolase family. (246 aa)    
Predicted Functional Partners:
AMP23695.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.980
AMP23696.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.875
AMP23693.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family.
       0.703
AMP23692.1
Pullulanase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.690
AMP22631.1
Cell division protein DivIVA; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.442
AMP25259.1
Secreted alanine rich protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.436
AMP26311.1
Exonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.427
AMP23465.1
Crp/Fnr family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.426
Your Current Organism:
Mycobacterium simiae
NCBI taxonomy Id: 1784
Other names: ATCC 25275, CCUG 29114, CCUG 42427, CIP 104531, DSM 44165, JCM 12377, M. simiae, Mycobacterium habana
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