STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMP23749.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (257 aa)    
Predicted Functional Partners:
AMP26153.1
MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
      0.873
AMP23750.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0301 (AlgH) family.
       0.798
AMP22925.1
Exopolyphosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.742
AMP22929.1
acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.627
AMP26046.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.614
AMP23202.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
      
 0.605
AMP21483.1
Glucose-methanol-choline oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.566
AMP21830.1
2-keto-gluconate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.566
AMP22800.1
Choline dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.566
AMP24276.1
Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.566
Your Current Organism:
Mycobacterium simiae
NCBI taxonomy Id: 1784
Other names: ATCC 25275, CCUG 29114, CCUG 42427, CIP 104531, DSM 44165, JCM 12377, M. simiae, Mycobacterium habana
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