STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMP23789.1Glyoxalase; Derived by automated computational analysis using gene prediction method: Protein Homology. (122 aa)    
Predicted Functional Partners:
AMP23788.1
MarR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.907
AMP25072.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.794
AMP25913.1
Beta-lactamase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.632
AMP25165.1
TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.558
AMP22711.1
Glyoxalase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.528
AMP23883.1
Short-chain dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
     0.524
AMP26044.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.448
AMP26161.1
Antigen; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the small heat shock protein (HSP20) family.
       0.426
AMP23790.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.411
AMP23237.1
TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.404
Your Current Organism:
Mycobacterium simiae
NCBI taxonomy Id: 1784
Other names: ATCC 25275, CCUG 29114, CCUG 42427, CIP 104531, DSM 44165, JCM 12377, M. simiae, Mycobacterium habana
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.