STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMP26181.1Dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (469 aa)    
Predicted Functional Partners:
AMP23875.1
Amino acid adenylation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.782
AMP23871.1
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.762
AMP23874.1
Amino acid adenylation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.740
AMP21974.1
Mammalian cell entry protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.486
AMP23961.1
Acyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.477
AMP26301.1
Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.450
AMP24513.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.445
AMP26037.1
LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.428
AMP26265.1
Integral membrane protein (Rhomboid family); Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.425
AMP23873.1
Thioesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.423
Your Current Organism:
Mycobacterium simiae
NCBI taxonomy Id: 1784
Other names: ATCC 25275, CCUG 29114, CCUG 42427, CIP 104531, DSM 44165, JCM 12377, M. simiae, Mycobacterium habana
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.