Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AMP21647.1 | AMP22498.1 | VC42_01110 | VC42_06770 | Multidrug ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Iron ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.435 |
| AMP21647.1 | AMP24228.1 | VC42_01110 | VC42_17715 | Multidrug ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the AAA ATPase family. | 0.780 |
| AMP22498.1 | AMP21647.1 | VC42_06770 | VC42_01110 | Iron ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | Multidrug ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.435 |
| AMP22498.1 | AMP24228.1 | VC42_06770 | VC42_17715 | Iron ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the AAA ATPase family. | 0.779 |
| AMP22498.1 | AMP25142.1 | VC42_06770 | VC42_23565 | Iron ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | Acetoin utilization protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.712 |
| AMP22498.1 | glpK | VC42_06770 | VC42_13050 | Iron ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family. | 0.618 |
| AMP22498.1 | htpG | VC42_06770 | VC42_04775 | Iron ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | Heat shock protein 90; Molecular chaperone. Has ATPase activity. | 0.446 |
| AMP22498.1 | prcA | VC42_06770 | VC42_03265 | Iron ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | Proteasome subunit alpha; Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation. Belongs to the peptidase T1A family. | 0.465 |
| AMP22498.1 | prcB | VC42_06770 | VC42_03270 | Iron ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | Proteasome subunit beta; Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation. Belongs to the peptidase T1B family. | 0.465 |
| AMP23705.1 | AMP24228.1 | VC42_14315 | VC42_17715 | DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the AAA ATPase family. | 0.747 |
| AMP24228.1 | AMP21647.1 | VC42_17715 | VC42_01110 | ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the AAA ATPase family. | Multidrug ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.780 |
| AMP24228.1 | AMP22498.1 | VC42_17715 | VC42_06770 | ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the AAA ATPase family. | Iron ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.779 |
| AMP24228.1 | AMP23705.1 | VC42_17715 | VC42_14315 | ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the AAA ATPase family. | DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.747 |
| AMP24228.1 | AMP24229.1 | VC42_17715 | VC42_17720 | ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the AAA ATPase family. | CDP-diacylglycerol--serine O-phosphatidyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. | 0.890 |
| AMP24228.1 | AMP25142.1 | VC42_17715 | VC42_23565 | ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the AAA ATPase family. | Acetoin utilization protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.806 |
| AMP24228.1 | glpK | VC42_17715 | VC42_13050 | ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the AAA ATPase family. | Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family. | 0.827 |
| AMP24228.1 | htpG | VC42_17715 | VC42_04775 | ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the AAA ATPase family. | Heat shock protein 90; Molecular chaperone. Has ATPase activity. | 0.792 |
| AMP24228.1 | prcA | VC42_17715 | VC42_03265 | ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the AAA ATPase family. | Proteasome subunit alpha; Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation. Belongs to the peptidase T1A family. | 0.749 |
| AMP24228.1 | prcB | VC42_17715 | VC42_03270 | ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the AAA ATPase family. | Proteasome subunit beta; Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation. Belongs to the peptidase T1B family. | 0.749 |
| AMP24228.1 | psd | VC42_17715 | VC42_17725 | ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the AAA ATPase family. | Phosphatidylserine decarboxylase; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer). | 0.874 |
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