Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AMP22808.1 | AMP24366.1 | VC42_08735 | VC42_18580 | RNA polymerase sigma24 factor; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. | ECF subfamily RNA polymerase sigma-24 subunit; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. | 0.513 |
AMP23625.1 | AMP24366.1 | VC42_13830 | VC42_18580 | ArsR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | ECF subfamily RNA polymerase sigma-24 subunit; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. | 0.422 |
AMP23898.1 | AMP24366.1 | VC42_15645 | VC42_18580 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | ECF subfamily RNA polymerase sigma-24 subunit; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. | 0.462 |
AMP23898.1 | AMP24367.1 | VC42_15645 | VC42_18585 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Transcription initiation protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.442 |
AMP24366.1 | AMP22808.1 | VC42_18580 | VC42_08735 | ECF subfamily RNA polymerase sigma-24 subunit; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. | RNA polymerase sigma24 factor; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. | 0.513 |
AMP24366.1 | AMP23625.1 | VC42_18580 | VC42_13830 | ECF subfamily RNA polymerase sigma-24 subunit; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. | ArsR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.422 |
AMP24366.1 | AMP23898.1 | VC42_18580 | VC42_15645 | ECF subfamily RNA polymerase sigma-24 subunit; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.462 |
AMP24366.1 | AMP24367.1 | VC42_18580 | VC42_18585 | ECF subfamily RNA polymerase sigma-24 subunit; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. | Transcription initiation protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.970 |
AMP24366.1 | AMP24368.1 | VC42_18580 | VC42_18590 | ECF subfamily RNA polymerase sigma-24 subunit; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. | SAM-dependent methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.741 |
AMP24366.1 | AMP25986.1 | VC42_18580 | VC42_08065 | ECF subfamily RNA polymerase sigma-24 subunit; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. | 3-demethylubiquinone-9 3-methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.405 |
AMP24367.1 | AMP23898.1 | VC42_18585 | VC42_15645 | Transcription initiation protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.442 |
AMP24367.1 | AMP24366.1 | VC42_18585 | VC42_18580 | Transcription initiation protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | ECF subfamily RNA polymerase sigma-24 subunit; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. | 0.970 |
AMP24367.1 | AMP24368.1 | VC42_18585 | VC42_18590 | Transcription initiation protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | SAM-dependent methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.802 |
AMP24368.1 | AMP24366.1 | VC42_18590 | VC42_18580 | SAM-dependent methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | ECF subfamily RNA polymerase sigma-24 subunit; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. | 0.741 |
AMP24368.1 | AMP24367.1 | VC42_18590 | VC42_18585 | SAM-dependent methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Transcription initiation protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.802 |
AMP25986.1 | AMP24366.1 | VC42_08065 | VC42_18580 | 3-demethylubiquinone-9 3-methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | ECF subfamily RNA polymerase sigma-24 subunit; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. | 0.405 |