Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AMP23633.1 | AMP24372.1 | VC42_13875 | VC42_18615 | Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.447 |
| AMP23633.1 | AMP26269.1 | VC42_13875 | VC42_18610 | Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. | SAM-dependent methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.433 |
| AMP23633.1 | gcvP | VC42_13875 | VC42_01170 | Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | 0.410 |
| AMP24371.1 | AMP26269.1 | VC42_18605 | VC42_18610 | SAM-dependent methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | SAM-dependent methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.503 |
| AMP24371.1 | gcvP | VC42_18605 | VC42_01170 | SAM-dependent methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | 0.702 |
| AMP24372.1 | AMP23633.1 | VC42_18615 | VC42_13875 | Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.447 |
| AMP24372.1 | AMP24373.1 | VC42_18615 | VC42_18620 | Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.992 |
| AMP24372.1 | AMP26269.1 | VC42_18615 | VC42_18610 | Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. | SAM-dependent methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.616 |
| AMP24373.1 | AMP24372.1 | VC42_18620 | VC42_18615 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.992 |
| AMP24373.1 | AMP26269.1 | VC42_18620 | VC42_18610 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | SAM-dependent methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.627 |
| AMP26269.1 | AMP23633.1 | VC42_18610 | VC42_13875 | SAM-dependent methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.433 |
| AMP26269.1 | AMP24371.1 | VC42_18610 | VC42_18605 | SAM-dependent methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | SAM-dependent methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.503 |
| AMP26269.1 | AMP24372.1 | VC42_18610 | VC42_18615 | SAM-dependent methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.616 |
| AMP26269.1 | AMP24373.1 | VC42_18610 | VC42_18620 | SAM-dependent methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.627 |
| AMP26269.1 | gcvP | VC42_18610 | VC42_01170 | SAM-dependent methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | 0.702 |
| gcvP | AMP23633.1 | VC42_01170 | VC42_13875 | Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.410 |
| gcvP | AMP24371.1 | VC42_01170 | VC42_18605 | Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | SAM-dependent methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.702 |
| gcvP | AMP26269.1 | VC42_01170 | VC42_18610 | Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | SAM-dependent methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.702 |