STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMP24405.1TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (218 aa)    
Predicted Functional Partners:
AMP24404.1
Major facilitator transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.682
AMP24933.1
Phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.598
AMP22246.1
Mce associated membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.578
AMP22194.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.549
AMP23678.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.531
AMP23100.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.452
AMP23144.1
Amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.448
AMP24353.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.445
AMP21607.1
Nitrile hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.443
AMP23228.1
MCE-family protein MCE1A; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.424
Your Current Organism:
Mycobacterium simiae
NCBI taxonomy Id: 1784
Other names: ATCC 25275, CCUG 29114, CCUG 42427, CIP 104531, DSM 44165, JCM 12377, M. simiae, Mycobacterium habana
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.