STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMP24485.1Type VII secretion protein EsxT; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the WXG100 family. (98 aa)    
Predicted Functional Partners:
AMP26287.1
Type VII secretion protein EsxU; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the WXG100 family.
  
 
 0.999
AMP24483.1
Secretion protein EccC; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.901
AMP24103.1
Type VII secretion protein EsxS; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the WXG100 family.
   
 
 0.824
AMP26430.1
Cell division protein FtsK; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.804
AMP24481.1
Serine protease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S8 family.
  
  
 0.792
AMP24482.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.774
rplM
50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.
       0.764
AMP24484.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.664
AMP23748.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.598
AMP25639.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.598
Your Current Organism:
Mycobacterium simiae
NCBI taxonomy Id: 1784
Other names: ATCC 25275, CCUG 29114, CCUG 42427, CIP 104531, DSM 44165, JCM 12377, M. simiae, Mycobacterium habana
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.