Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AMP24539.1SAM-dependent methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (201 aa)    
Predicted Functional Partners:
AMP24538.1
RNA methyltransferase; Could methylate the ribose at the nucleotide 34 wobble position in tRNA; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily.
     
 0.637
AMP25764.1
Monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.512
AMP25769.1
2-polyprenyl-6-methoxyphenol hydroxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.512
AMP21749.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.512
AMP21767.1
Oxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.512
AMP21851.1
Monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.512
AMP22003.1
Salicylate hydroxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.512
AMP25862.1
Monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.512
AMP22053.1
FAD-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.512
AMP22303.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.512
Your Current Organism:
Mycobacterium simiae
NCBI taxonomy Id: 1784
Other names: ATCC 25275, CCUG 29114, CCUG 42427, CIP 104531, DSM 44165, JCM 12377, M. simiae, Mycobacterium habana
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