Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AMP24528.1 | AMP24568.1 | VC42_19555 | VC42_19800 | Nucleoside hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Cytidine deaminase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.716 |
| AMP24528.1 | AMP24569.1 | VC42_19555 | VC42_19805 | Nucleoside hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Pyrimidine-nucleoside phosphorylase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.709 |
| AMP24528.1 | AMP24577.1 | VC42_19555 | VC42_19865 | Nucleoside hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Purine nucleoside phosphorylase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.921 |
| AMP24528.1 | upp | VC42_19555 | VC42_19855 | Nucleoside hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Uracil phosphoribosyltransferase; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate. | 0.614 |
| AMP24564.1 | AMP24565.1 | VC42_19780 | VC42_19785 | Succinate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Part of four member fumarate reductase enzyme complex FrdABCD which catalyzes the reduction of fumarate to succinate during anaerobic respiration; FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit, respectively; FrdCD are the membrane components which interact with quinone and are involved in electron transfer; the catalytic subunits are similar to succinate dehydrogenase SdhAB; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.999 |
| AMP24564.1 | AMP24566.1 | VC42_19780 | VC42_19790 | Succinate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Succinate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.999 |
| AMP24564.1 | AMP24567.1 | VC42_19780 | VC42_19795 | Succinate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Succinate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.999 |
| AMP24564.1 | AMP24568.1 | VC42_19780 | VC42_19800 | Succinate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Cytidine deaminase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.769 |
| AMP24564.1 | AMP24569.1 | VC42_19780 | VC42_19805 | Succinate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Pyrimidine-nucleoside phosphorylase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.769 |
| AMP24564.1 | deoC | VC42_19780 | VC42_17945 | Succinate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily. | 0.462 |
| AMP24565.1 | AMP24564.1 | VC42_19785 | VC42_19780 | Part of four member fumarate reductase enzyme complex FrdABCD which catalyzes the reduction of fumarate to succinate during anaerobic respiration; FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit, respectively; FrdCD are the membrane components which interact with quinone and are involved in electron transfer; the catalytic subunits are similar to succinate dehydrogenase SdhAB; Derived by automated computational analysis using gene prediction method: Protein Homology. | Succinate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.999 |
| AMP24565.1 | AMP24566.1 | VC42_19785 | VC42_19790 | Part of four member fumarate reductase enzyme complex FrdABCD which catalyzes the reduction of fumarate to succinate during anaerobic respiration; FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit, respectively; FrdCD are the membrane components which interact with quinone and are involved in electron transfer; the catalytic subunits are similar to succinate dehydrogenase SdhAB; Derived by automated computational analysis using gene prediction method: Protein Homology. | Succinate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.999 |
| AMP24565.1 | AMP24567.1 | VC42_19785 | VC42_19795 | Part of four member fumarate reductase enzyme complex FrdABCD which catalyzes the reduction of fumarate to succinate during anaerobic respiration; FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit, respectively; FrdCD are the membrane components which interact with quinone and are involved in electron transfer; the catalytic subunits are similar to succinate dehydrogenase SdhAB; Derived by automated computational analysis using gene prediction method: Protein Homology. | Succinate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.999 |
| AMP24565.1 | AMP24568.1 | VC42_19785 | VC42_19800 | Part of four member fumarate reductase enzyme complex FrdABCD which catalyzes the reduction of fumarate to succinate during anaerobic respiration; FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit, respectively; FrdCD are the membrane components which interact with quinone and are involved in electron transfer; the catalytic subunits are similar to succinate dehydrogenase SdhAB; Derived by automated computational analysis using gene prediction method: Protein Homology. | Cytidine deaminase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.769 |
| AMP24565.1 | AMP24569.1 | VC42_19785 | VC42_19805 | Part of four member fumarate reductase enzyme complex FrdABCD which catalyzes the reduction of fumarate to succinate during anaerobic respiration; FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit, respectively; FrdCD are the membrane components which interact with quinone and are involved in electron transfer; the catalytic subunits are similar to succinate dehydrogenase SdhAB; Derived by automated computational analysis using gene prediction method: Protein Homology. | Pyrimidine-nucleoside phosphorylase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.769 |
| AMP24566.1 | AMP24564.1 | VC42_19790 | VC42_19780 | Succinate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Succinate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.999 |
| AMP24566.1 | AMP24565.1 | VC42_19790 | VC42_19785 | Succinate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Part of four member fumarate reductase enzyme complex FrdABCD which catalyzes the reduction of fumarate to succinate during anaerobic respiration; FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit, respectively; FrdCD are the membrane components which interact with quinone and are involved in electron transfer; the catalytic subunits are similar to succinate dehydrogenase SdhAB; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.999 |
| AMP24566.1 | AMP24567.1 | VC42_19790 | VC42_19795 | Succinate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Succinate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.999 |
| AMP24566.1 | AMP24568.1 | VC42_19790 | VC42_19800 | Succinate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Cytidine deaminase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.769 |
| AMP24566.1 | AMP24569.1 | VC42_19790 | VC42_19805 | Succinate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Pyrimidine-nucleoside phosphorylase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.781 |
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