Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AMP21498.1 | AMP26391.1 | VC42_00130 | VC42_22540 | DNA recombination protein RecN; May be involved in recombinational repair of damaged DNA. | Dihydroxyacetone kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.513 |
| AMP21498.1 | recG | VC42_00130 | VC42_22545 | DNA recombination protein RecN; May be involved in recombinational repair of damaged DNA. | ATP-dependent DNA helicase RecG; Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y- DNA); Belongs to the helicase family. RecG subfamily. | 0.522 |
| AMP22326.1 | AMP26391.1 | VC42_05735 | VC42_22540 | DegV domain-containing protein Mb2440c; Derived by automated computational analysis using gene prediction method: Protein Homology. | Dihydroxyacetone kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.986 |
| AMP23716.1 | AMP26391.1 | VC42_14395 | VC42_22540 | Serine/threonine protein kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Dihydroxyacetone kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.421 |
| AMP23716.1 | glmU | VC42_14395 | VC42_08495 | Serine/threonine protein kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Glucosamine-1-phosphate N-acetyltransferase; Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc). The C- terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N- acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5-monophosphate (from uridine 5- triphosphate), a reaction catalyzed by the N-terminal domain. | 0.719 |
| AMP23740.1 | AMP26391.1 | VC42_14555 | VC42_22540 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Dihydroxyacetone kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.432 |
| AMP24978.1 | AMP26391.1 | VC42_22550 | VC42_22540 | Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Dihydroxyacetone kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.828 |
| AMP24978.1 | recG | VC42_22550 | VC42_22545 | Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | ATP-dependent DNA helicase RecG; Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y- DNA); Belongs to the helicase family. RecG subfamily. | 0.853 |
| AMP24978.1 | rpmB-2 | VC42_22550 | VC42_22535 | Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 50S ribosomal protein L28; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bL28 family. | 0.704 |
| AMP26391.1 | AMP21498.1 | VC42_22540 | VC42_00130 | Dihydroxyacetone kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA recombination protein RecN; May be involved in recombinational repair of damaged DNA. | 0.513 |
| AMP26391.1 | AMP22326.1 | VC42_22540 | VC42_05735 | Dihydroxyacetone kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. | DegV domain-containing protein Mb2440c; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.986 |
| AMP26391.1 | AMP23716.1 | VC42_22540 | VC42_14395 | Dihydroxyacetone kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Serine/threonine protein kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.421 |
| AMP26391.1 | AMP23740.1 | VC42_22540 | VC42_14555 | Dihydroxyacetone kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.432 |
| AMP26391.1 | AMP24978.1 | VC42_22540 | VC42_22550 | Dihydroxyacetone kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.828 |
| AMP26391.1 | glmU | VC42_22540 | VC42_08495 | Dihydroxyacetone kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Glucosamine-1-phosphate N-acetyltransferase; Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc). The C- terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N- acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5-monophosphate (from uridine 5- triphosphate), a reaction catalyzed by the N-terminal domain. | 0.441 |
| AMP26391.1 | recG | VC42_22540 | VC42_22545 | Dihydroxyacetone kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. | ATP-dependent DNA helicase RecG; Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y- DNA); Belongs to the helicase family. RecG subfamily. | 0.956 |
| AMP26391.1 | rpmB-2 | VC42_22540 | VC42_22535 | Dihydroxyacetone kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 50S ribosomal protein L28; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bL28 family. | 0.781 |
| glmU | AMP23716.1 | VC42_08495 | VC42_14395 | Glucosamine-1-phosphate N-acetyltransferase; Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc). The C- terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N- acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5-monophosphate (from uridine 5- triphosphate), a reaction catalyzed by the N-terminal domain. | Serine/threonine protein kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.719 |
| glmU | AMP26391.1 | VC42_08495 | VC42_22540 | Glucosamine-1-phosphate N-acetyltransferase; Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc). The C- terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N- acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5-monophosphate (from uridine 5- triphosphate), a reaction catalyzed by the N-terminal domain. | Dihydroxyacetone kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.441 |
| recG | AMP21498.1 | VC42_22545 | VC42_00130 | ATP-dependent DNA helicase RecG; Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y- DNA); Belongs to the helicase family. RecG subfamily. | DNA recombination protein RecN; May be involved in recombinational repair of damaged DNA. | 0.522 |
page 1 of 2