Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AMP25437.1 | AMP25439.1 | VC42_25500 | VC42_25510 | ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.777 |
| AMP25437.1 | AMP25442.1 | VC42_25500 | VC42_25525 | ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate. | 0.741 |
| AMP25437.1 | ctaB | VC42_25500 | VC42_25530 | ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group. | 0.602 |
| AMP25437.1 | pgl | VC42_25500 | VC42_25505 | ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 6-phosphogluconolactonase; Hydrolysis of 6-phosphogluconolactone to 6-phosphogluconate. | 0.777 |
| AMP25437.1 | tal-2 | VC42_25500 | VC42_25520 | ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 2 subfamily. | 0.745 |
| AMP25437.1 | zwf-3 | VC42_25500 | VC42_25515 | ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Glucose-6-phosphate dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone. | 0.745 |
| AMP25439.1 | AMP25437.1 | VC42_25510 | VC42_25500 | Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.777 |
| AMP25439.1 | AMP25442.1 | VC42_25510 | VC42_25525 | Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate. | 0.885 |
| AMP25439.1 | ctaB | VC42_25510 | VC42_25530 | Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group. | 0.549 |
| AMP25439.1 | pgl | VC42_25510 | VC42_25505 | Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 6-phosphogluconolactonase; Hydrolysis of 6-phosphogluconolactone to 6-phosphogluconate. | 0.995 |
| AMP25439.1 | tal-2 | VC42_25510 | VC42_25520 | Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 2 subfamily. | 0.910 |
| AMP25439.1 | zwf-3 | VC42_25510 | VC42_25515 | Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Glucose-6-phosphate dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone. | 0.946 |
| AMP25442.1 | AMP25437.1 | VC42_25525 | VC42_25500 | Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate. | ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.741 |
| AMP25442.1 | AMP25439.1 | VC42_25525 | VC42_25510 | Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate. | Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.885 |
| AMP25442.1 | ctaB | VC42_25525 | VC42_25530 | Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate. | Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group. | 0.779 |
| AMP25442.1 | pgl | VC42_25525 | VC42_25505 | Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate. | 6-phosphogluconolactonase; Hydrolysis of 6-phosphogluconolactone to 6-phosphogluconate. | 0.898 |
| AMP25442.1 | tal-2 | VC42_25525 | VC42_25520 | Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate. | Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 2 subfamily. | 0.999 |
| AMP25442.1 | zwf-3 | VC42_25525 | VC42_25515 | Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate. | Glucose-6-phosphate dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone. | 0.968 |
| ctaB | AMP25437.1 | VC42_25530 | VC42_25500 | Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group. | ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.602 |
| ctaB | AMP25439.1 | VC42_25530 | VC42_25510 | Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group. | Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.549 |
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