STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMP25460.1Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (62 aa)    
Predicted Functional Partners:
AMP25459.1
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.934
AMP25458.1
enoyl-CoA hydratase; Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the enoyl-CoA hydratase/isomerase family.
       0.765
AMP24661.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.570
AMP22226.1
Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.562
AMP23450.1
Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.531
AMP25237.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.528
AMP24540.1
Dynein regulation protein LC7; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.505
AMP25121.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.500
AMP24325.1
Glyoxalase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.484
AMP25087.1
GCN5 family acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.484
Your Current Organism:
Mycobacterium simiae
NCBI taxonomy Id: 1784
Other names: ATCC 25275, CCUG 29114, CCUG 42427, CIP 104531, DSM 44165, JCM 12377, M. simiae, Mycobacterium habana
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.