Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
AMP25526.1Inv protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (271 aa)    
Predicted Functional Partners:
AMP25463.1
Peptidase M23; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
0.795
AMP23641.1
PirG; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.781
AMP25525.1
Acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.761
AMP25524.1
Malto-oligosyltrehalose synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 13 family.
  
    0.731
AMP25522.1
Malto-oligosyltrehalose trehalohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.728
AMP25523.1
Maltooligosyl trehalose synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.728
AMP24807.1
Cell division protein FtsX; Part of the ABC transporter FtsEX involved in cellular division; Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.
 
 
 
 0.724
AMP21500.1
Channel-forming protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 
 0.698
AMP25225.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  
 0.668
AMP22138.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.649
Your Current Organism:
Mycobacterium simiae
NCBI taxonomy Id: 1784
Other names: ATCC 25275, CCUG 29114, CCUG 42427, CIP 104531, DSM 44165, JCM 12377, M. simiae, Mycobacterium habana
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