STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001691415_00052Unannotated protein. (307 aa)    
Predicted Functional Partners:
GCA_001691415_02271
Unannotated protein.
  
 
 0.922
GCA_001691415_04366
Unannotated protein.
    
  0.868
GCA_001691415_01362
Unannotated protein.
  
 
 0.848
GCA_001691415_04101
Unannotated protein.
    
  0.836
GCA_001691415_00053
Unannotated protein.
       0.735
GCA_001691415_04039
Unannotated protein.
    
  0.718
GCA_001691415_00453
Unannotated protein.
  
 
 0.678
GCA_001691415_01522
Unannotated protein.
   
  0.653
GCA_001691415_00324
Unannotated protein.
    
  0.635
GCA_001691415_03127
Unannotated protein.
    
  0.625
Your Current Organism:
Pararhodobacter sp. CCBMM2
NCBI taxonomy Id: 1786003
Other names: P. sp. CCB-MM2, Pararhodobacter sp. CCB-MM2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.