STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001691415_00971Unannotated protein. (305 aa)    
Predicted Functional Partners:
GCA_001691415_00970
Unannotated protein.
 
     0.954
GCA_001691415_00972
Unannotated protein.
 
     0.915
GCA_001691415_00969
Unannotated protein.
 
    0.898
GCA_001691415_00973
Unannotated protein.
 
     0.812
GCA_001691415_00964
Unannotated protein.
 
     0.797
GCA_001691415_00965
Unannotated protein.
 
     0.795
GCA_001691415_00963
Unannotated protein.
 
     0.783
GCA_001691415_00967
Unannotated protein.
 
     0.771
GCA_001691415_00966
Unannotated protein.
 
     0.766
GCA_001691415_01722
Unannotated protein.
  
 
 0.765
Your Current Organism:
Pararhodobacter sp. CCBMM2
NCBI taxonomy Id: 1786003
Other names: P. sp. CCB-MM2, Pararhodobacter sp. CCB-MM2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.