STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001691415_00998Unannotated protein. (369 aa)    
Predicted Functional Partners:
GCA_001691415_01000
Unannotated protein.
  
  0.943
GCA_001691415_01879
Unannotated protein.
  
  0.822
GCA_001691415_00999
Unannotated protein.
 
    
0.820
GCA_001691415_03589
Unannotated protein.
 
     0.651
GCA_001691415_01722
Unannotated protein.
 
  
  0.650
GCA_001691415_01651
Unannotated protein.
 
  
  0.581
GCA_001691415_03591
Unannotated protein.
  
    0.575
GCA_001691415_01657
Unannotated protein.
 
     0.564
GCA_001691415_04209
Unannotated protein.
  
    0.558
GCA_001691415_01804
Unannotated protein.
    
  0.520
Your Current Organism:
Pararhodobacter sp. CCBMM2
NCBI taxonomy Id: 1786003
Other names: P. sp. CCB-MM2, Pararhodobacter sp. CCB-MM2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.