STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001691415_01055Unannotated protein. (128 aa)    
Predicted Functional Partners:
GCA_001691415_03675
Unannotated protein.
    
  0.926
GCA_001691415_02313
Unannotated protein.
  
  
  0.598
GCA_001691415_01056
Unannotated protein.
       0.572
GCA_001691415_01057
Unannotated protein.
       0.572
GCA_001691415_01054
Unannotated protein.
       0.501
GCA_001691415_01058
Unannotated protein.
       0.478
GCA_001691415_01076
Unannotated protein.
       0.447
GCA_001691415_03143
Unannotated protein.
  
     0.427
GCA_001691415_00214
Unannotated protein.
  
     0.417
GCA_001691415_01061
Unannotated protein.
 
     0.414
Your Current Organism:
Pararhodobacter sp. CCBMM2
NCBI taxonomy Id: 1786003
Other names: P. sp. CCB-MM2, Pararhodobacter sp. CCB-MM2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.