STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001691415_01443Unannotated protein. (129 aa)    
Predicted Functional Partners:
GCA_001691415_01442
Unannotated protein.
 
 0.999
GCA_001691415_01447
Unannotated protein.
 
 0.999
GCA_001691415_01703
Unannotated protein.
 
 0.998
GCA_001691415_01446
Unannotated protein.
 
 
0.984
GCA_001691415_03506
Unannotated protein.
  
  0.979
GCA_001691415_01445
Unannotated protein.
 
  
 0.977
GCA_001691415_01441
Unannotated protein.
 
  
 0.970
GCA_001691415_04725
Unannotated protein.
 
  
 0.902
GCA_001691415_03487
Unannotated protein.
     0.860
GCA_001691415_03484
Unannotated protein.
 
  
 0.849
Your Current Organism:
Pararhodobacter sp. CCBMM2
NCBI taxonomy Id: 1786003
Other names: P. sp. CCB-MM2, Pararhodobacter sp. CCB-MM2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.