STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001691415_02196Unannotated protein. (324 aa)    
Predicted Functional Partners:
GCA_001691415_02195
Unannotated protein.
 
 0.988
GCA_001691415_02192
Unannotated protein.
 0.980
GCA_001691415_03982
Unannotated protein.
 0.961
GCA_001691415_03980
Unannotated protein.
 0.942
GCA_001691415_02504
Unannotated protein.
 0.916
GCA_001691415_02506
Unannotated protein.
 
 0.911
GCA_001691415_03596
Unannotated protein.
 0.911
GCA_001691415_00744
Unannotated protein.
 0.887
GCA_001691415_03692
Unannotated protein.
 0.882
GCA_001691415_00747
Unannotated protein.
  
 0.845
Your Current Organism:
Pararhodobacter sp. CCBMM2
NCBI taxonomy Id: 1786003
Other names: P. sp. CCB-MM2, Pararhodobacter sp. CCB-MM2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.