STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001691415_02529Unannotated protein. (638 aa)    
Predicted Functional Partners:
GCA_001691415_00649
Unannotated protein.
 
 
 0.959
GCA_001691415_00448
Unannotated protein.
 
  
 0.871
GCA_001691415_02649
Unannotated protein.
  
 0.845
GCA_001691415_00436
Unannotated protein.
 
   
 0.844
GCA_001691415_00447
Unannotated protein.
 
  
 0.843
GCA_001691415_04639
Unannotated protein.
  
 0.806
GCA_001691415_03136
Unannotated protein.
 
   
 0.776
GCA_001691415_04647
Unannotated protein.
     
 0.760
GCA_001691415_03444
Unannotated protein.
   
 
  0.535
GCA_001691415_02447
Unannotated protein.
     
 0.520
Your Current Organism:
Pararhodobacter sp. CCBMM2
NCBI taxonomy Id: 1786003
Other names: P. sp. CCB-MM2, Pararhodobacter sp. CCB-MM2
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.