STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001691415_02637Unannotated protein. (391 aa)    
Predicted Functional Partners:
GCA_001691415_02660
Unannotated protein.
      0.852
GCA_001691415_02738
Unannotated protein.
    
 0.766
GCA_001691415_03343
Unannotated protein.
    
 0.766
GCA_001691415_00383
Unannotated protein.
 
  
 0.735
GCA_001691415_02636
Unannotated protein.
       0.630
GCA_001691415_01651
Unannotated protein.
      0.558
GCA_001691415_02638
Unannotated protein.
       0.545
GCA_001691415_00786
Unannotated protein.
  
 
 0.515
GCA_001691415_00229
Unannotated protein.
     
 0.513
GCA_001691415_03818
Unannotated protein.
   
 
  0.503
Your Current Organism:
Pararhodobacter sp. CCBMM2
NCBI taxonomy Id: 1786003
Other names: P. sp. CCB-MM2, Pararhodobacter sp. CCB-MM2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.