STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001691415_04279Unannotated protein. (153 aa)    
Predicted Functional Partners:
GCA_001691415_04278
Unannotated protein.
 
     0.723
GCA_001691415_04269
Unannotated protein.
 
     0.651
GCA_001691415_04276
Unannotated protein.
 
     0.651
GCA_001691415_04277
Unannotated protein.
       0.548
GCA_001691415_03538
Unannotated protein.
  
     0.503
GCA_001691415_03497
Unannotated protein.
  
     0.494
GCA_001691415_02169
Unannotated protein.
  
     0.492
GCA_001691415_03495
Unannotated protein.
  
     0.484
GCA_001691415_04499
Unannotated protein.
  
     0.450
Your Current Organism:
Pararhodobacter sp. CCBMM2
NCBI taxonomy Id: 1786003
Other names: P. sp. CCB-MM2, Pararhodobacter sp. CCB-MM2
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.