STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OBF18843.1Ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology. (64 aa)    
Predicted Functional Partners:
OBF18844.1
TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.907
OBF18878.1
Cytochrome; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the cytochrome P450 family.
 
  
 0.905
OBF18842.1
Amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.865
OBF18839.1
CoA-transferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the CoA-transferase III family.
       0.821
OBF18841.1
Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.821
OBF18838.1
Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.763
OBF18840.1
Xaa-Pro aminopeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.691
OBF16122.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.652
OBF18879.1
MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.603
OBF24424.1
Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.
     
 0.581
Your Current Organism:
Mycobacterium szulgai
NCBI taxonomy Id: 1787
Other names: ATCC 35799, CCUG 37675, CIP 104532, DSM 44166, JCM 6383, M. szulgai, NCTC 10831
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.