Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
A5725_17455Mandelate racemase; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology. (329 aa)    
Predicted Functional Partners:
OBF17488.1
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.827
OBF15112.1
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.712
OBF19855.1
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.712
OBF18247.1
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.712
OBF18249.1
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.712
OBF18250.1
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.712
OBF19821.1
Gluconolaconase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.683
OBF15399.1
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.662
OBF17640.1
3-oxoacyl-ACP synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.622
OBF21827.1
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.613
Your Current Organism:
Mycobacterium szulgai
NCBI taxonomy Id: 1787
Other names: ATCC 35799, CCUG 37675, CIP 104532, DSM 44166, JCM 6383, M. szulgai, NCTC 10831
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