STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OBF19173.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (103 aa)    
Predicted Functional Partners:
OBF19172.1
Glutamine amidotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.934
OBF19171.1
AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.636
OBF19359.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.616
OBF24479.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.585
OBF19170.1
Acyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.569
OBF24328.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.543
OBF23258.1
Type VII secretion integral membrane protein EccD; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.482
OBF21844.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.452
OBF22915.1
RNA polymerase subunit sigma; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
   
 
 0.447
sigA
RNA polymerase sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.
   
 
 0.447
Your Current Organism:
Mycobacterium szulgai
NCBI taxonomy Id: 1787
Other names: ATCC 35799, CCUG 37675, CIP 104532, DSM 44166, JCM 6383, M. szulgai, NCTC 10831
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.