STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ODG93983.1methylmalonyl-CoA carboxyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (516 aa)    
Predicted Functional Partners:
ODG93982.1
methylmalonyl-CoA epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.985
ODG91286.1
acetyl-CoA carboxylase biotin carboxylase subunit; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.
 
 0.979
ODG90585.1
Biotin carboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.978
ODG91352.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.973
ODG91248.1
methylmalonyl-CoA epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.939
ODG93979.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.928
ODG93980.1
methylmalonyl-CoA mutase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.910
ODG90638.1
3-hydroxyacyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.909
birA
biotin--[acetyl-CoA-carboxylase] ligase; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family.
 
 
 0.883
ODG93981.1
ATPase/protein kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.873
Your Current Organism:
Bacillus luciferensis
NCBI taxonomy Id: 178774
Other names: B. luciferensis, Bacillus luciferensis Logan et al. 2002, CIP 107105, DSM 18845, JCM 12212, LMG 18422, LMG:18422, strain Logan B1761, strain SSI061
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.