node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ODG90252.1 | ODG91157.1 | BED47_13055 | BED47_09025 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0297 family. | RNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.687 |
ODG90252.1 | ODG91231.1 | BED47_13055 | BED47_09185 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0297 family. | Hypothetical protein; Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY/ffh. May be a regulatory protein. | 0.732 |
ODG90252.1 | ODG91796.1 | BED47_13055 | BED47_04710 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0297 family. | DUF951 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.728 |
ODG91156.1 | ODG91157.1 | BED47_09020 | BED47_09025 | 50S ribosomal protein L7; Derived by automated computational analysis using gene prediction method: Protein Homology. | RNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.964 |
ODG91156.1 | infB | BED47_09020 | BED47_09015 | 50S ribosomal protein L7; Derived by automated computational analysis using gene prediction method: Protein Homology. | Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily. | 0.999 |
ODG91156.1 | nusA | BED47_09020 | BED47_09030 | 50S ribosomal protein L7; Derived by automated computational analysis using gene prediction method: Protein Homology. | Transcription termination/antitermination protein NusA; Participates in both transcription termination and antitermination. | 0.957 |
ODG91156.1 | rimP | BED47_09020 | BED47_09035 | 50S ribosomal protein L7; Derived by automated computational analysis using gene prediction method: Protein Homology. | Ribosome maturation factor RimP; Required for maturation of 30S ribosomal subunits. Belongs to the RimP family. | 0.936 |
ODG91156.1 | rplD | BED47_09020 | BED47_21365 | 50S ribosomal protein L7; Derived by automated computational analysis using gene prediction method: Protein Homology. | 50S ribosomal protein L4; Forms part of the polypeptide exit tunnel. | 0.999 |
ODG91156.1 | rplW | BED47_09020 | BED47_21370 | 50S ribosomal protein L7; Derived by automated computational analysis using gene prediction method: Protein Homology. | 50S ribosomal protein L23; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family. | 0.999 |
ODG91156.1 | rpsL | BED47_09020 | BED47_21335 | 50S ribosomal protein L7; Derived by automated computational analysis using gene prediction method: Protein Homology. | 30S ribosomal protein S12; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit. | 0.999 |
ODG91157.1 | ODG90252.1 | BED47_09025 | BED47_13055 | RNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0297 family. | 0.687 |
ODG91157.1 | ODG91156.1 | BED47_09025 | BED47_09020 | RNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 50S ribosomal protein L7; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.964 |
ODG91157.1 | ODG91231.1 | BED47_09025 | BED47_09185 | RNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY/ffh. May be a regulatory protein. | 0.701 |
ODG91157.1 | ODG91796.1 | BED47_09025 | BED47_04710 | RNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | DUF951 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.765 |
ODG91157.1 | infB | BED47_09025 | BED47_09015 | RNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily. | 0.937 |
ODG91157.1 | nusA | BED47_09025 | BED47_09030 | RNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Transcription termination/antitermination protein NusA; Participates in both transcription termination and antitermination. | 0.945 |
ODG91157.1 | rimP | BED47_09025 | BED47_09035 | RNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Ribosome maturation factor RimP; Required for maturation of 30S ribosomal subunits. Belongs to the RimP family. | 0.946 |
ODG91157.1 | rplD | BED47_09025 | BED47_21365 | RNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 50S ribosomal protein L4; Forms part of the polypeptide exit tunnel. | 0.694 |
ODG91157.1 | rplW | BED47_09025 | BED47_21370 | RNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 50S ribosomal protein L23; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family. | 0.692 |
ODG91157.1 | rpsL | BED47_09025 | BED47_21335 | RNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 30S ribosomal protein S12; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit. | 0.686 |