STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sspH-2Small, acid-soluble spore protein, H family; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the SspH family. (59 aa)    
Predicted Functional Partners:
ODG93050.1
Spore gernimation protein GerQ; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.706
ODG93047.1
Spore gernimation protein GerQ; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.668
ODG90368.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.656
ODG93046.1
Spore gernimation protein GerQ; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.650
ODG92177.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.608
ODG89715.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.589
ODG92175.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.549
ODG93484.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.514
ODG93626.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.513
ODG89931.1
Damage-inducible protein DinB; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.472
Your Current Organism:
Bacillus luciferensis
NCBI taxonomy Id: 178774
Other names: B. luciferensis, Bacillus luciferensis Logan et al. 2002, CIP 107105, DSM 18845, JCM 12212, LMG 18422, LMG:18422, strain Logan B1761, strain SSI061
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.