STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ODG92138.1Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (310 aa)    
Predicted Functional Partners:
ODG92146.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
  0.970
ODG92826.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
  0.876
ODG90317.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
    
  0.716
ODG90013.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.679
ODG90572.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.606
ODG92137.1
Malic enzyme; oxaloacetate-decarboxylating; NAD-dependent; catalyzes the formation of pyruvate form malate; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.466
ODG92139.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.433
ODG90024.1
Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
  0.426
ODG91911.1
Two-component system response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.423
ODG89718.1
B12-binding domain-containing radical SAM protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.401
Your Current Organism:
Bacillus luciferensis
NCBI taxonomy Id: 178774
Other names: B. luciferensis, Bacillus luciferensis Logan et al. 2002, CIP 107105, DSM 18845, JCM 12212, LMG 18422, LMG:18422, strain Logan B1761, strain SSI061
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.