STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
tmoC(2Fe-2S)-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (111 aa)    
Predicted Functional Partners:
tmoA
Toluene monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
  0.989
tmoE
Toluene hydroxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
  0.987
tmoD
Monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.979
tmoB
Toluene monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.977
nirA_2
Sulfite reductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
    
 0.908
cysA2_2
Thiosulfate sulfurtransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.906
sseA
Thiosulfate sulfurtransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.906
cysA2_1
Thiosulfate sulfurtransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.906
cysH
Phosphoadenosine phosphosulfate reductase; Reduction of activated sulfate into sulfite. Belongs to the PAPS reductase family. CysH subfamily.
    
 0.905
ssuE
NADPH-dependent FMN reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.900
Your Current Organism:
Mycolicibacter terrae
NCBI taxonomy Id: 1788
Other names: ATCC 15755, CCUG 27847, CIP 104321, DSM 43227, JCM 12143, LMG 10394, LMG:10394, M. terrae, Mycobacterium terrae
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