Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
lprM_1Mammalian cell entry protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (384 aa)    
Predicted Functional Partners:
ORW90814.1
Mammalian cell entry protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.967
mce1F
Mammalian cell entry protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.961
ORW90815.1
Virulence factor Mce; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.960
ORW90813.1
Mammalian cell entry protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.955
ORW90990.1
MCE-family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.954
ORW90812.1
Mammalian cell entry protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.954
mce1C
Mammalian cell entry protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.951
mce1A
MCE-family protein MCE1A; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.949
ORW94147.1
MCE-family protein MCE3A; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.949
mce1D
Mammalian cell entry protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.948
Your Current Organism:
Mycolicibacter terrae
NCBI taxonomy Id: 1788
Other names: ATCC 15755, CCUG 27847, CIP 104321, DSM 43227, JCM 12143, LMG 10394, LMG:10394, M. terrae, Mycobacterium terrae
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