STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ORW90902.1TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (33 aa)    
Predicted Functional Partners:
ORW90903.1
Mycofactocin system protein MftB; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.773
pqqE
Mycofactocin radical SAM maturase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.773
lldD1
Alpha-hydroxy-acid oxidizing enzyme; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.773
ethR_3
Mycofactocin system transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.541
crnA
Mycofactocin system creatininase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.460
ORW90907.1
Mycofactocin system glycosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.460
pno
Glucose-methanol-choline oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.460
Your Current Organism:
Mycolicibacter terrae
NCBI taxonomy Id: 1788
Other names: ATCC 15755, CCUG 27847, CIP 104321, DSM 43227, JCM 12143, LMG 10394, LMG:10394, M. terrae, Mycobacterium terrae
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