STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ORW97408.1Pyridoxamine 5-phosphate oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (150 aa)    
Predicted Functional Partners:
soxR_1
MerR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.577
ORW97417.1
Nitroreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.571
ORW90802.1
Xylose isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.556
ORW90803.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.483
ORW94190.1
Exopolyphosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.458
ORW96114.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.441
ORW90860.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.440
mdh
Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 2 family.
  
    0.439
ORW88216.1
Carboxylate--amine ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.434
ORW94122.1
Proteasome protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.434
Your Current Organism:
Mycolicibacter terrae
NCBI taxonomy Id: 1788
Other names: ATCC 15755, CCUG 27847, CIP 104321, DSM 43227, JCM 12143, LMG 10394, LMG:10394, M. terrae, Mycobacterium terrae
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.