Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
lipI_1Lipase; Derived by automated computational analysis using gene prediction method: Protein Homology. (318 aa)    
Predicted Functional Partners:
pamO_4
Cyclohexanone monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.889
pnp
5'-methylthioadenosine phosphorylase; Catalyzes the reversible phosphorylation of S-methyl-5'- thioadenosine (MTA) to adenine and 5-methylthioribose-1-phosphate. Involved in the breakdown of MTA, a major by-product of polyamine biosynthesis. Responsible for the first step in the methionine salvage pathway after MTA has been generated from S-adenosylmethionine. Has broad substrate specificity with 6-aminopurine nucleosides as preferred substrates; Belongs to the PNP/MTAP phosphorylase family. MTAP subfamily.
 
  
 0.782
hapE_4
Monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.771
ORW91368.1
fatty-acid--CoA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.681
eryA
Beta-ketoacyl synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.607
ORW96953.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.601
pamO_3
Monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.572
hapE_5
4-hydroxyacetophenone monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.546
pamO_1
Monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.534
pamO_2
Monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.524
Your Current Organism:
Mycolicibacter terrae
NCBI taxonomy Id: 1788
Other names: ATCC 15755, CCUG 27847, CIP 104321, DSM 43227, JCM 12143, LMG 10394, LMG:10394, M. terrae, Mycobacterium terrae
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