STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
comEAHypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (283 aa)    
Predicted Functional Partners:
comEC
Competence protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.708
ORW91488.1
Peptidase A24; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.708
eis
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.694
ORW91615.1
FAD-linked oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.623
ssb_2
Single-stranded DNA-binding protein; Binds to single stranded DNA and may facilitate the binding and interaction of other proteins to DNA; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.595
ssb_1
Single-stranded DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.595
ORW94950.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.579
comM
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.573
rodA
Cell division protein FtsW; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the SEDS family.
 
  
 0.559
cinA
Competence/damage-inducible protein A; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the CinA family.
     
 0.557
Your Current Organism:
Mycolicibacter terrae
NCBI taxonomy Id: 1788
Other names: ATCC 15755, CCUG 27847, CIP 104321, DSM 43227, JCM 12143, LMG 10394, LMG:10394, M. terrae, Mycobacterium terrae
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.