Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ORW89409.1Amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (422 aa)    
Predicted Functional Partners:
araD
Aldolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.769
serA2
Hydroxyacid dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
       0.723
pdhR_1
GntR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.693
ORW90659.1
Acetoacetate decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.645
ORW90796.1
Amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.622
nfdA_1
Amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.600
ORW95668.1
Hemerythrin; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.550
ORW98043.1
Acyl dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.534
pknD_1
Gluconolaconase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.524
ORW90984.1
Dihydrodipicolinate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.496
Your Current Organism:
Mycolicibacter terrae
NCBI taxonomy Id: 1788
Other names: ATCC 15755, CCUG 27847, CIP 104321, DSM 43227, JCM 12143, LMG 10394, LMG:10394, M. terrae, Mycobacterium terrae
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