Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
slyATranscriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (139 aa)    
Predicted Functional Partners:
ORW95654.1
Glyoxalase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.781
hycE
Formate hydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.668
hycQ
Hydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.648
hycP
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.648
hycD
Formate hydrogenlyase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.648
hyfB
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.648
ORW89598.1
ArsR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.644
hycG
Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.615
pyrH
UMP kinase; Catalyzes the reversible phosphorylation of UMP to UDP.
  
    0.488
ORW91974.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0301 (AlgH) family.
   
  
 0.416
Your Current Organism:
Mycolicibacter terrae
NCBI taxonomy Id: 1788
Other names: ATCC 15755, CCUG 27847, CIP 104321, DSM 43227, JCM 12143, LMG 10394, LMG:10394, M. terrae, Mycobacterium terrae
Server load: medium (50%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.