ORX21503.1 protein (Mycobacterium xenopi) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Current Organism:

Mycobacterium xenopi

NCBI taxonomy Id: 1789
Other names: ATCC 19250, CCUG 28011, CCUG 31306, CIP 104035, DSM 43995, JCM 15661, M. xenopi, Mycobacterium xenopei, NCTC 10042

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Mec	MurI	AWC32_01030	AWC32_01010	Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glutamate racemase; Provides the (R)-glutamate required for cell wall biosynthesis.	0.819
Mec	ORX21494.1	AWC32_01030	AWC32_01025	Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Molybdopterin synthase sulfur carrier subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.992
Mec	ORX21496.1	AWC32_01030	AWC32_01035	Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.849
Mec	ORX21497.1	AWC32_01030	AWC32_01040	Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.850
Mec	ORX21503.1	AWC32_01030	AWC32_01005	Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.715
Mec	PncB1	AWC32_01030	AWC32_01050	Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Nicotinate phosphoribosyltransferase; Catalyzes the first step in the biosynthesis of NAD from nicotinic acid, the ATP-dependent synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate. Belongs to the NAPRTase family.	0.774
Mec	clpS	AWC32_01030	AWC32_01045	Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	ATP-dependent Clp protease adaptor ClpS; Involved in the modulation of the specificity of the ClpAP- mediated ATP-dependent protein degradation; Belongs to the ClpS family.	0.771
Mec	cysM	AWC32_01030	AWC32_01020	Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Cysteine synthase; Catalyzes the formation of cysteine from 3-O-acetyl-L-serine and hydrogen sulfide; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.994
Mec	rph	AWC32_01030	AWC32_01000	Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation.	0.701
MurI	Mec	AWC32_01010	AWC32_01030	Glutamate racemase; Provides the (R)-glutamate required for cell wall biosynthesis.	Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.819
MurI	ORX21494.1	AWC32_01010	AWC32_01025	Glutamate racemase; Provides the (R)-glutamate required for cell wall biosynthesis.	Molybdopterin synthase sulfur carrier subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.793
MurI	ORX21496.1	AWC32_01010	AWC32_01035	Glutamate racemase; Provides the (R)-glutamate required for cell wall biosynthesis.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.759
MurI	ORX21497.1	AWC32_01010	AWC32_01040	Glutamate racemase; Provides the (R)-glutamate required for cell wall biosynthesis.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.745
MurI	ORX21503.1	AWC32_01010	AWC32_01005	Glutamate racemase; Provides the (R)-glutamate required for cell wall biosynthesis.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.648
MurI	PncB1	AWC32_01010	AWC32_01050	Glutamate racemase; Provides the (R)-glutamate required for cell wall biosynthesis.	Nicotinate phosphoribosyltransferase; Catalyzes the first step in the biosynthesis of NAD from nicotinic acid, the ATP-dependent synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate. Belongs to the NAPRTase family.	0.662
MurI	clpS	AWC32_01010	AWC32_01045	Glutamate racemase; Provides the (R)-glutamate required for cell wall biosynthesis.	ATP-dependent Clp protease adaptor ClpS; Involved in the modulation of the specificity of the ClpAP- mediated ATP-dependent protein degradation; Belongs to the ClpS family.	0.717
MurI	cysM	AWC32_01010	AWC32_01020	Glutamate racemase; Provides the (R)-glutamate required for cell wall biosynthesis.	Cysteine synthase; Catalyzes the formation of cysteine from 3-O-acetyl-L-serine and hydrogen sulfide; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.952
MurI	rph	AWC32_01010	AWC32_01000	Glutamate racemase; Provides the (R)-glutamate required for cell wall biosynthesis.	Hypothetical protein; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation.	0.597
ORX20617.1	ORX21503.1	AWC32_04825	AWC32_01005	Crp/Fnr family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.686
ORX21494.1	Mec	AWC32_01025	AWC32_01030	Molybdopterin synthase sulfur carrier subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.992