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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ORX21267.1Phosphatidylinositol kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (271 aa)    
Predicted Functional Partners:
ORX21266.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.972
TB22.2
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.963
ORX10391.1
Helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.954
ORX21265.1
Phosphoglycerate mutase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.936
mshC
cysteine--1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside ligase; Mycothiol biosynthesis; catalyzes the ligation of cysteine to a mycothiol precursor; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.841
Prk
Phosphoribulokinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.823
SerS
serine--tRNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.813
ORX21268.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.811
ORX21304.1
Histone deacetylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.771
UppP
Undecaprenyl-diphosphatase; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP); Belongs to the UppP family.
       0.754
Your Current Organism:
Mycobacterium xenopi
NCBI taxonomy Id: 1789
Other names: ATCC 19250, CCUG 28011, CCUG 31306, CIP 104035, DSM 43995, JCM 15661, M. xenopi, Mycobacterium xenopei, NCTC 10042
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