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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ORX21196.13-ketoacyl-CoA thiolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (146 aa)    
Predicted Functional Partners:
ORX21167.1
acyl-CoA synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.742
ORX21168.1
Ring-hydroxylating dioxygenase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.710
ORX21195.1
Ring-hydroxylating oxygenase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.709
ORX21175.1
acetyl-CoA acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.616
ORX21197.1
Thiolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.612
Ltp2_1
Lipid-transfer protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.612
Ltp2_2
Thiolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.612
PaaG_1
enoyl-CoA hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.609
ORX21165.1
Carnitine dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.606
ORX20665.1
acetyl-CoA acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.603
Your Current Organism:
Mycobacterium xenopi
NCBI taxonomy Id: 1789
Other names: ATCC 19250, CCUG 28011, CCUG 31306, CIP 104035, DSM 43995, JCM 15661, M. xenopi, Mycobacterium xenopei, NCTC 10042
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