Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ORX21046.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (562 aa)    
Predicted Functional Partners:
AWC32_02415
Non-ribosomal peptide synthetase; Incomplete; too short partial abutting assembly gap; missing start and stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.808
ORX21047.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.773
ORX13513.1
Secretion protein EccC; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.547
AWC32_14280
Type VII secretion AAA-ATPase EccA; Incomplete; partial in the middle of a contig; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.499
ORX18651.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.473
ORX14146.1
Cell division protein FtsK; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.460
folP
Dihydropteroate synthase; Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8- dihydropteroate (H2Pte), the immediate precursor of folate derivatives.
  
    0.449
folP2
Dihydropteroate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.449
EccC2
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.443
EccB3
Type VII secretion protein EccB; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.426
Your Current Organism:
Mycobacterium xenopi
NCBI taxonomy Id: 1789
Other names: ATCC 19250, CCUG 28011, CCUG 31306, CIP 104035, DSM 43995, JCM 15661, M. xenopi, Mycobacterium xenopei, NCTC 10042
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