Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ORX21051.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (199 aa)    
Predicted Functional Partners:
mtaP
5'-methylthioadenosine phosphorylase; Catalyzes the reversible phosphorolysis of 5'-deoxy-5'- methylthioadenosine (MTA) to adenine and 5-methylthio-D-ribose-1- phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.964
AhcY
Adenosylhomocysteinase; Catalyzes the formation of L-homocysteine from S-adenosyl-L-homocysteine; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.913
ORX20977.1
Laccase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.907
ORX21111.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.903
ORX21004.1
DNA methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.903
bioB
Biotin synthase; Catalyzes the formation of biotin from dethiobiotin and sulfur 2 S-adenosyl-L-methionine; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.657
ORX21050.1
LysR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.580
GltB
Glutamate synthase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.499
nadE
NAD synthetase; Catalyzes the formation of nicotinamide adenine dinucleotide (NAD) from nicotinic acid adenine dinucleotide (NAAD) using either ammonia or glutamine as the amide donor and ATP; ammonia-utilizing enzymes include the ones from Bacillus and Escherichia coli while glutamine-utilizing enzymes include the Mycobacterial one; forms homodimers; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.498
arsC
Arsenate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ArsC family.
  
  
 0.477
Your Current Organism:
Mycobacterium xenopi
NCBI taxonomy Id: 1789
Other names: ATCC 19250, CCUG 28011, CCUG 31306, CIP 104035, DSM 43995, JCM 15661, M. xenopi, Mycobacterium xenopei, NCTC 10042
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