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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ORX21004.1DNA methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (481 aa)    
Predicted Functional Partners:
metK
Catalyzes the formation of S-adenosylmethionine from methionine and ATP; methionine adenosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.919
ORX21111.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.912
AhcY
Adenosylhomocysteinase; Catalyzes the formation of L-homocysteine from S-adenosyl-L-homocysteine; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.909
ORX21051.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
    
  0.903
ORX21008.1
Phage-associated protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.773
ORX21005.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.773
AWC32_02765
Serine/threonine protein kinase; Incomplete; too short partial abutting assembly gap; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.767
ORX21003.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.511
ORX13063.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
     0.490
ORX21001.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.471
Your Current Organism:
Mycobacterium xenopi
NCBI taxonomy Id: 1789
Other names: ATCC 19250, CCUG 28011, CCUG 31306, CIP 104035, DSM 43995, JCM 15661, M. xenopi, Mycobacterium xenopei, NCTC 10042
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