close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
aldAlanine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (371 aa)    
Predicted Functional Partners:
alr
Alanine racemase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.974
AspC
Aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.910
PntB
NAD(P) transhydrogenase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.
      0.909
ORX20564.1
AsnC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.817
GltB
Glutamate synthase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.
      
 0.752
regX3
XRE family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  
 0.575
MmcO
Oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.548
GcvP
Glycine dehydrogenase (aminomethyl-transferring); Acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.489
ORX20718.1
Monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.483
senX3
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.452
Your Current Organism:
Mycobacterium xenopi
NCBI taxonomy Id: 1789
Other names: ATCC 19250, CCUG 28011, CCUG 31306, CIP 104035, DSM 43995, JCM 15661, M. xenopi, Mycobacterium xenopei, NCTC 10042
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