Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ORX20321.1Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (279 aa)    
Predicted Functional Partners:
glpK
Converts glycerol and ADP to glycerol-3-phosphate and ADP; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.943
pdxp
HAD family hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
  0.918
ORX13443.1
HAD family hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
  0.917
adhC
Alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.900
ORX13046.1
Lipase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.900
ORX09420.1
Lipase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.900
nuoE
NADH dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.830
NuoD_1
NADH dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the complex I 49 kDa subunit family.
  
 
 0.821
FadD15
Long-chain fatty acid--CoA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.815
ORX21155.1
acyl-CoA synthetase; Activates fatty acids by binding to coenzyme A; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.812
Your Current Organism:
Mycobacterium xenopi
NCBI taxonomy Id: 1789
Other names: ATCC 19250, CCUG 28011, CCUG 31306, CIP 104035, DSM 43995, JCM 15661, M. xenopi, Mycobacterium xenopei, NCTC 10042
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