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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EsxTType VII secretion protein EsxT; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the WXG100 family. (98 aa)    
Predicted Functional Partners:
EsxU
Type VII secretion protein EsxU; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the WXG100 family.
  
 
 0.999
EccC4
Secretion protein EccC; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.915
ORX20040.1
Type VII secretion-associated protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.911
FtsK
Cell division protein FtsK; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the FtsK/SpoIIIE/SftA family.
  
 
 0.839
EccC2
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.805
ORX20016.1
Type VII secretion-associated serine protease mycosin; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.787
EsxP_2
Peptidase M22; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the WXG100 family.
   
  
 0.702
rplM
50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.
       0.694
Mpt51
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.694
FbpB
Diacylglycerol acyltransferase/mycolyltransferase Ag85A; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.684
Your Current Organism:
Mycobacterium xenopi
NCBI taxonomy Id: 1789
Other names: ATCC 19250, CCUG 28011, CCUG 31306, CIP 104035, DSM 43995, JCM 15661, M. xenopi, Mycobacterium xenopei, NCTC 10042
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