Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ORX19646.1Glutamate--cysteine ligase; Derived by automated computational analysis using gene prediction method: Protein Homology. (499 aa)    
Predicted Functional Partners:
glpK
Converts glycerol and ADP to glycerol-3-phosphate and ADP; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.705
EgtD
Dimethylhistidine N-methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.525
ORX20792.1
Stage II sporulation protein E; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.502
ORX20947.1
Cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.501
ORX19262.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.491
ORX16161.1
XRE family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.467
ORX20791.1
Stage II sporulation protein M; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.456
hom
Homoserine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.431
EgtC
Class II glutamine amidotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.428
ORX16064.1
Class II glutamine amidotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.428
Your Current Organism:
Mycobacterium xenopi
NCBI taxonomy Id: 1789
Other names: ATCC 19250, CCUG 28011, CCUG 31306, CIP 104035, DSM 43995, JCM 15661, M. xenopi, Mycobacterium xenopei, NCTC 10042
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