node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Ffh | FtsY | AWC32_08785 | AWC32_08755 | Signal recognition particle; Derived by automated computational analysis using gene prediction method: Protein Homology. | Cell division protein FtsY; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.999 |
Ffh | FtsZ | AWC32_08785 | AWC32_03080 | Signal recognition particle; Derived by automated computational analysis using gene prediction method: Protein Homology. | Cell division protein FtsZ; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.535 |
Ffh | SecG | AWC32_08785 | AWC32_19050 | Signal recognition particle; Derived by automated computational analysis using gene prediction method: Protein Homology. | Preprotein translocase subunit SecG; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.972 |
Ffh | rpoB | AWC32_08785 | AWC32_17880 | Signal recognition particle; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA-directed RNA polymerase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the RNA polymerase beta chain family. | 0.562 |
Ffh | secA | AWC32_08785 | AWC32_10555 | Signal recognition particle; Derived by automated computational analysis using gene prediction method: Protein Homology. | Accessory Sec system translocase SecA2; SecA2; functions in protein export; can interact with acidic membrane phospholipids and the SecYEG protein complex; binds to preproteins; binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein; ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane; additional proteins SecD/F/YajC aid SecA recycling; exists in an equilibrium between monomers and dimers; may possibly form higher order oligomers; proteins in this cluster correspond to SecA2; wh [...] | 0.974 |
Ffh | secA-2 | AWC32_08785 | AWC32_12120 | Signal recognition particle; Derived by automated computational analysis using gene prediction method: Protein Homology. | Preprotein translocase subunit SecA; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane. | 0.974 |
Ffh | secE | AWC32_08785 | AWC32_17775 | Signal recognition particle; Derived by automated computational analysis using gene prediction method: Protein Homology. | Preprotein translocase subunit SecE; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the SecE/SEC61-gamma family. | 0.987 |
Ffh | secY | AWC32_08785 | AWC32_20305 | Signal recognition particle; Derived by automated computational analysis using gene prediction method: Protein Homology. | Preprotein translocase subunit SecY; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently. | 0.995 |
Ffh | yajC | AWC32_08785 | AWC32_19530 | Signal recognition particle; Derived by automated computational analysis using gene prediction method: Protein Homology. | Preprotein translocase subunit YajC; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.967 |
Ffh | yidC | AWC32_08785 | AWC32_17045 | Signal recognition particle; Derived by automated computational analysis using gene prediction method: Protein Homology. | Preprotein translocase YidC; Functions to insert inner membrane proteins into the IM in Escherichia coli; interacts with transmembrane segments; functions in both Sec-dependent and -independent membrane insertion; similar to Oxa1p in mitochondria; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.960 |
FtsY | Ffh | AWC32_08755 | AWC32_08785 | Cell division protein FtsY; Derived by automated computational analysis using gene prediction method: Protein Homology. | Signal recognition particle; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.999 |
FtsY | SecG | AWC32_08755 | AWC32_19050 | Cell division protein FtsY; Derived by automated computational analysis using gene prediction method: Protein Homology. | Preprotein translocase subunit SecG; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.984 |
FtsY | rpoB | AWC32_08755 | AWC32_17880 | Cell division protein FtsY; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA-directed RNA polymerase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the RNA polymerase beta chain family. | 0.440 |
FtsY | secA | AWC32_08755 | AWC32_10555 | Cell division protein FtsY; Derived by automated computational analysis using gene prediction method: Protein Homology. | Accessory Sec system translocase SecA2; SecA2; functions in protein export; can interact with acidic membrane phospholipids and the SecYEG protein complex; binds to preproteins; binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein; ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane; additional proteins SecD/F/YajC aid SecA recycling; exists in an equilibrium between monomers and dimers; may possibly form higher order oligomers; proteins in this cluster correspond to SecA2; wh [...] | 0.977 |
FtsY | secA-2 | AWC32_08755 | AWC32_12120 | Cell division protein FtsY; Derived by automated computational analysis using gene prediction method: Protein Homology. | Preprotein translocase subunit SecA; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane. | 0.974 |
FtsY | secE | AWC32_08755 | AWC32_17775 | Cell division protein FtsY; Derived by automated computational analysis using gene prediction method: Protein Homology. | Preprotein translocase subunit SecE; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the SecE/SEC61-gamma family. | 0.983 |
FtsY | secY | AWC32_08755 | AWC32_20305 | Cell division protein FtsY; Derived by automated computational analysis using gene prediction method: Protein Homology. | Preprotein translocase subunit SecY; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently. | 0.996 |
FtsY | yajC | AWC32_08755 | AWC32_19530 | Cell division protein FtsY; Derived by automated computational analysis using gene prediction method: Protein Homology. | Preprotein translocase subunit YajC; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.962 |
FtsY | yidC | AWC32_08755 | AWC32_17045 | Cell division protein FtsY; Derived by automated computational analysis using gene prediction method: Protein Homology. | Preprotein translocase YidC; Functions to insert inner membrane proteins into the IM in Escherichia coli; interacts with transmembrane segments; functions in both Sec-dependent and -independent membrane insertion; similar to Oxa1p in mitochondria; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.952 |
FtsZ | Ffh | AWC32_03080 | AWC32_08785 | Cell division protein FtsZ; Derived by automated computational analysis using gene prediction method: Protein Homology. | Signal recognition particle; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.535 |